• Herd, S., Krueger, K., Nair, A., Mollick, J., & O’Reilly, R. (2021). Neural mechanisms of human decision-making. Cognitive, Affective, & Behavioral Neuroscience, 21(1), 35-57
• Mollick, J. A., Hazy, T. E., Krueger, K. A., Nair, A., Mackie, P., Herd, S. A., & O’Reilly, R. C. (2020). A systems-neuroscience model of phasic dopamine. Psychological Review, 127(6), 972.
• O’Reilly, R. C., Nair, A., Russin, J. L., & Herd, S. A. (2020). How sequential interactive processing within frontostriatal loops supports a continuum of habitual to controlled processing. Frontiers in psychology, 11, 380.
• O’Reilly, R. C., Russin, J., & Herd, S. A. (2019). Computational models of motivated frontal function. Handbook of clinical neurology, 163, 317-332.
• O’Reilly, R. C., Hazy, T. E., & Herd, S. A. (2016). The leabra cognitive architecture: How to play 20 principles with nature. The Oxford handbook of cognitive science, 91, 91-116.
• Herd, S. A., Hazy, T. E., Chatham, C. H., Brant, A. M., & Friedman, N. P. (2014). A neural network model of individual differences in task switching abilities. Neuropsychologia, 62, 375-389.
• Herd, S., Szabados, A., Vinokurov, Y., Lebiere, C., Cline, A & O’Reilly, R.C. (2014) Integrating theories of motor sequencing in the SAL hybrid architecture. Biologically Inspired Cognitive Architectures 8, 100-108
• Vinokurov, Y., Lebiere, C., Szabados, A., Herd, S.A., & O’Reilly, R.C. (2013). Integrating top-down expectations with bottom-up perceptual processing in a hybrid neural-symbolic architecture. Biologically Inspired Cognitive Architectures, 6, 140-146.
• Herd, S.A., Kruger, K., Huang, T.R., Kriete, T., Hazy, T.E., & O’Reilly, R.O. (2013).  Strategic cognitive sequencing: a computational cognitive neuroscience approach.  Computational Intelligence and Neuroscience, Volume 2013, Article ID 149329
• Huang, T.R., Herd, S.A., Hazy, T.E., & O’Reilly, R.O. (2013).  Assembling old tricks for new tasks: a neural model of instructional learning and control. Journal of Cognitive Neuroscience, 25(6), 843-851
• O’Reilly, R.C., Wyatte, D., Herd, S., Mingus, B., & Jilk, D. (2013). Recurrent processing during object recognition. Frontiers in Psychology, 4(124)
• Wyatte, D., Herd, S.A., Mingus, B., O’Reilly, R.C. (2012). The Role of Competitive Inhibition and Top-Down Feedback in Binding during Object Recognition. Frontiers in Psychology, 3(182)
• Mingus, B., Kriete, T., Herd, S., Wyatte, D., Latimer, K., O’Reilly, R.C. (2011) Generalization of Figure-Ground Segmentation from Binocular to Monocular Vision in an Embodied Biological Brain Model. Proceedings of the 4th Conference on Artificial General Intelligence: Lecture Notes in Computer Science 6830, 351-356
• O’Reilly, R.C., Pauli, W. & Herd, S.A. (2011). Computational models of cognitive control.  Current Opinion in Neurobiology. 20(2), 257-261
• Munakata Y, Herd S.A., Chatham C.H., Depue B.E., Banich M.T., O’Reilly R.C. (2011) A unified framework for inhibitory control. Trends in Cognitive Science;15(10), 453-459
• Herd,  S.A., Urland, G., Mingus,  B., O’Reilly, R.C. (2011) Human-artificial-intelligence hybrid learning systems. Frontiers in Artificial Intelligence and Applications 233, 132 – 137
• Vinokurov, Y., Lebiere, C., Herd, S., & O’Reilly, R. (2011).  A metacognitive classifier using a hybrid act-r/leabra architecture.  Lifelong Learning: Papers from the 2011 AAAI Workshop (WS-11-15).
• Chatham, C.H., Herd, S.A., Brant, A.M., Hazy, T.E., Miyake, A., O’Reilly, R.C. & Friedman, N.P.  (2011) From the executive network to the executive functions: A computational model of the n-back task.  Journal of Cognitive Neuroscience, 23(11), 3598-3619
• Herd, S.A., Mingus, B. & O’Reilly, R.C. (2010). Dopamine and self-directed learning. Proceeding of the 2010 conference on Biologically Inspired Cognitive Architectures 2010. Amsterdam: IOS Press.
• O’Reilly, R. C., Herd, S. A., & Pauli, W. M. (2010). Computational models of cognitive control. Current opinion in neurobiology, 20(2), 257-261.
• Taatgen, N.A., Juvina, I., Herd, S.A., Jilk, D. & Martens, S. (2007). Attentional Blink: an internal traffic jam? Proceedings of the eighth International Conference on Cognitive Modeling (pp. 91-96). New York: Psychology Press.
• Herd, S.A., Banich, M.T. &  O’Reilly, R.C. (2006). Neural mechanisms of cognitive control: an integrative model of Stroop task performance.  Journal of Cognitive Neuroscience, 18(1), 22-32
• Herd, S.A., & O’Reilly, R.C. (2005). Serial visual search from a parallel model.  Vision Research, 45(24). 2987-2992
• Herd, S. A. (2005). Mechanisms of visual search (Doctoral dissertation, University of Colorado at Boulder).